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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015828778.1_cds_XP_016503522.1_17058
CDS Infomation

[gene=LOC107821600] [db_xref=GeneID:107821600] [protein=metacaspase-3-like] [protein_id=XP_016503522.1] [location=join(104042..104501,105134..105464,105563..105683,106634..106792,107109..107168)] [gbkey=CDS]
Sequence

ATGGAAAGCAGAAGGCACAGCTGCAGGCAGTGTGGACTGCAGCTGCCAGCTCCTATTGGA
GTAAAAGCCATTTACTGTCCAAGGTGCCAACGTTCCACACAATTCCAACCAAGAAATAAT
ATGCATGGTGTCCCTACAGTCAATGCCAACGGGCCGTACAGTAACAATATTAATGCAATG
AACACAGGGCTACCAGCTTATCCTGCCAAACCAAGTCAATTAACAACTGGATTTGGTTAT
GGAAATTATAGGCCACAGTCCTTCCAGTTCAGGTCACCACAGGTCATGCGACCTCAGCCT
CCACCAGCAGTGCATGGACGGAAGCGAGCAGTTCTATGTGGAGCTAACTACCGTGGGCAT
AACAAGAGTTTGAAAGGTAGCATCAATGACGTTTTAGCCATGAGATATCTTTTGGTCGAC
AAGTTGGGGTTCCCCAATGCATCAGTAATTGTTCTTACAGAGAATGAGAAAGATATATTT
AGAATCCCAACCAAAGCCAATATTAGAGCAGCCCTGCGTTGGCTTGTTCACAGTTGCCAA
CCAGGTGATTCATTGGTATTTCATTACTCTGGCCATGGCTCACGAGTACGTGACCTTGAC
GGCGATGAAATTGATGGATACGATGAATCACTATGCCCTATTGACTTCGAAACAGAAGGA
CGAATACTAGATGATGAGATCAACGAAACCATTATAAGGCCTCTACCTCGTGGTGCCACA
CTTCATGCTATAATTGACGCTTGCCATAGTGGAACTTTTCTAGATTTGCAGTTCATGTGC
AGAATAAACAGGGGAGGAAGCTATATGTGGGAAGATCATCGCACTCCACACAGCACATAT
AAAGGTACCAGAGGGGGAATAGCAATATGTATCAGCGCCTGTGATGATCATCAGAGCTCT
GGAGATACCATTGCTTTCACAGGTTTTCCAACTGGTGCACTGACTTATAGTTTTGTGAAA
ACAATGGAGCAAGAGCCTAAATTGACTTATGGACGCTTGCTTCTATCAATGCACAAGAAG
ATCCACGAGACACAGAAAGGAATAGGCCTGAATAGTAAAGATGTATCTCAGGAGCCTCAA
CTATCCGCTTCTGTACGGTTTGATATCCACTCCAAGCTACTCACCCTATAG

Peptide Sequence

PEP ID

XP_016503522.1
PEP Infomation

PREDICTED: metacaspase-3-like [Nicotiana tabacum]
Sequence

MESRRHSCRQCGLQLPAPIGVKAIYCPRCQRSTQFQPRNNMHGVPTVNANGPYSNNINAM
NTGLPAYPAKPSQLTTGFGYGNYRPQSFQFRSPQVMRPQPPPAVHGRKRAVLCGANYRGH
NKSLKGSINDVLAMRYLLVDKLGFPNASVIVLTENEKDIFRIPTKANIRAALRWLVHSCQ
PGDSLVFHYSGHGSRVRDLDGDEIDGYDESLCPIDFETEGRILDDEINETIIRPLPRGAT
LHAIIDACHSGTFLDLQFMCRINRGGSYMWEDHRTPHSTYKGTRGGIAICISACDDHQSS
GDTIAFTGFPTGALTYSFVKTMEQEPKLTYGRLLLSMHKKIHETQKGIGLNSKDVSQEPQ
LSASVRFDIHSKLLTL

Transcript Sequence

Gene sequence data has not been registered.